BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030A08SP1|AL429151
(961 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1152 1744 0.0
>3x_Contig1152
Length = 5366
Score = 1744 bits (867), Expect = 0.0
Identities = 930/961 (96%), Gaps = 2/961 (0%)
Strand = Plus / Plus
Query: 1 ccaagtgtcatcaccggcaaagaatattttcttgttatgcagataaagctgttttattaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 889 ccaagtgtcatcaccggcaaagaatattttcttgttatgcagataaagctgttttattaa 948
Query: 61 gttatcctcatcgatcacatcaccattgahattcgatcctgcctctatmaatgtaggcma 120
||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||| |
Sbjct: 949 gttatcctcatcgatcacatcaccattgaaattcgatcctgcatctataaatgtaggcaa 1008
Query: 121 ggnacctgttgtcaatccctttaatctttgtmgcgtagttgtgggaggntcagccaaama 180
|| |||||||||||||||||||||||||||| |||||||||||||||| ||||||||| |
Sbjct: 1009 ggaacctgttgtcaatccctttaatctttgtagcgtagttgtgggaggatcagccaaaaa 1068
Query: 181 cttcaacaagacagahtccgttgagttatgggccgtctcataaagmactttcaaattgtt 240
||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1069 cttcaacaagacagaatccgttgagttatgggccgtctcataaagaactttcaaattgtt 1128
Query: 241 atgataattagggttgtacttggcatgattttcatctactggmatmacgaaatcaaacct 300
|||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 1129 atgataattagggttgtacttggcatgattttcatctactggaataacgaaatcaaacct 1188
Query: 301 caatgcgtccactattagtaaaaccatcttatcgtattthgcttcgaagggaagctgggg 360
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1189 caatgcgtccactattagtaaaaccatcttatcgtatttagcttcgaagggaagctgggg 1248
Query: 361 atcmagttctgccacgttatccaacaccgtccttgttaaaaggaacccttttgcgaaasa 420
||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1249 atcaagttctgcaacgttatccaacaccgtccttgttaaaaggaacccttttgcgaaaaa 1308
Query: 421 tgctatggaaatmaactgcmatacagccaaagaagccagtyatagtatgtycagagtgtg 480
|||||||||||| |||||| |||||||||||||||| ||| ||||||||| |||||||||
Sbjct: 1309 tgctatggaaataaactgcaatacagccaaagaagcaagtaatagtatgtacagagtgtg 1368
Query: 481 cgtcgacttgaaccttgatatccgatagctcattcgactggvcctcgtttgaggccccat 540
||| ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 1369 cgtagacttgaaccttgatatccgatagctcattcgactggacctcgtttgagg-cccat 1427
Query: 541 tatgctgagtctaattctctctgcccgatctcgttcatcactaacagtgggattcatcac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1428 tatgctgagtctaattctctctgcccgatctcgttcatcactaacagtgggattcatcac 1487
Query: 601 ttcttaccagtttccaaacgggacacaaacacaactaaacgaaagtwcaataaattcacg 660
||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct: 1488 ttcttaccagtttccaaacgggacaaaaacacaactaaacgaaagtacaataaattcacg 1547
Query: 661 ttgaataatgatattgtgcagaagaattgagttacactggcgaaagtggttcgcttatct 720
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1548 ttgaataatgatattgtgcagaagaattgagtcacactggcgaaagtggttcgcttatct 1607
Query: 721 ctcgcctctgacagagttcttgttaccactttatttcattttaaaggttaatttctttta 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1608 ctcgcctctgacagagttcttgttaccactttatttcattttaaaggttaatttctttta 1667
Query: 781 aaacagaacaattgtacatcacgtgatchttgttccctcttcaaataatgcaactccaat 840
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1668 aaacagaacaattgtacatcacgtgatcattgttccctcttcaaataatgcaactccaat 1727
Query: 841 tctgatcggcgaagatactgaccattgagcygagtggatccatgggtattatcaacggtg 900
|||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||
Sbjct: 1728 tctgatcggcgaagatactgaccattgagctgagtggatccat-ggtattatcaacggtg 1786
Query: 901 gcaagggctcattagaaccytgtttatttcaatttgttctgttttcttctttaggaaatg 960
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1787 gcaagggctcattagaaccttgtttatttcaatttgttctgttttcttctttaggaaatg 1846
Query: 961 t 961
|
Sbjct: 1847 t 1847
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5926
Number of Sequences: 1807
Number of extensions: 5926
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 961
length of database: 10,358,551
effective HSP length: 16
effective length of query: 945
effective length of database: 10,329,639
effective search space: 9761508855
effective search space used: 9761508855
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.6 bits)
S2: 50 (101.0 bits)